simulator

Model wrappers.

Simulator package

Here you can put the wrappers for simulator used with PET.

You can build your wrapper (almost) any way you like, but you must follow the following rules:

1. The wrapper must be a Class
2. The Class must contain the following three methods:

__init__(self,input_dict):
    # parse information from the input. 
    # Needs to get datatype, reporttype and reportpoint

Setup_fwd_run(self)
   # do whatever initiallization you need.
   # Useful to initiallize the self.pred_data variable.
   # self.pred_data is a list of dictionaries. Where each list element represents
   # a reportpoint and the dictionary should have the datatypes as keys. 
   # Entries in the dictionary are numpy arrays.

run_fwd_sim(self, state, member)
  # run simulator. Called from the main function using p_map from p_tqdm package.
  # Return pred_data if run is successfull, False if run failed.